Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DJ90_2414 | cotE | DJ90_2414 | DJ90_5714 | Hypothetical protein. | Spore coat protein E. | 0.585 |
DJ90_2414 | dpaA | DJ90_2414 | DJ90_2589 | Hypothetical protein. | spore_dpaA: dipicolinic acid synthetase, A subunit. | 0.661 |
DJ90_2414 | mntP | DJ90_2414 | DJ90_5385 | Hypothetical protein. | Hypothetical protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family. | 0.602 |
DJ90_2601 | cotE | DJ90_2601 | DJ90_5714 | Hypothetical protein. | Spore coat protein E. | 0.717 |
DJ90_2601 | dpaA | DJ90_2601 | DJ90_2589 | Hypothetical protein. | spore_dpaA: dipicolinic acid synthetase, A subunit. | 0.527 |
DJ90_2601 | dpaB | DJ90_2601 | DJ90_2590 | Hypothetical protein. | spore_dpaB: dipicolinic acid synthetase, B subunit. | 0.495 |
DJ90_3116 | dpaA | DJ90_3116 | DJ90_2589 | GerA spore germination family protein. | spore_dpaA: dipicolinic acid synthetase, A subunit. | 0.547 |
DJ90_3116 | dpaB | DJ90_3116 | DJ90_2590 | GerA spore germination family protein. | spore_dpaB: dipicolinic acid synthetase, B subunit. | 0.645 |
DJ90_3116 | spoIIID | DJ90_3116 | DJ90_6197 | GerA spore germination family protein. | spore_III_D: sporulation transcriptional regulator SpoIIID. | 0.735 |
DJ90_3116 | spoIVA | DJ90_3116 | DJ90_3167 | GerA spore germination family protein. | Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. | 0.765 |
DJ90_3116 | spoVT | DJ90_3116 | DJ90_6273 | GerA spore germination family protein. | Stage V sporulation protein T. | 0.751 |
DJ90_3116 | yqfD | DJ90_3116 | DJ90_645 | GerA spore germination family protein. | spore_yqfD: sporulation protein YqfD. | 0.730 |
cotE | DJ90_2414 | DJ90_5714 | DJ90_2414 | Spore coat protein E. | Hypothetical protein. | 0.585 |
cotE | DJ90_2601 | DJ90_5714 | DJ90_2601 | Spore coat protein E. | Hypothetical protein. | 0.717 |
cotE | dpaA | DJ90_5714 | DJ90_2589 | Spore coat protein E. | spore_dpaA: dipicolinic acid synthetase, A subunit. | 0.545 |
cotE | mntP | DJ90_5714 | DJ90_5385 | Spore coat protein E. | Hypothetical protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family. | 0.492 |
cotE | spoIIID | DJ90_5714 | DJ90_6197 | Spore coat protein E. | spore_III_D: sporulation transcriptional regulator SpoIIID. | 0.701 |
cotE | spoIVA | DJ90_5714 | DJ90_3167 | Spore coat protein E. | Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat. | 0.735 |
cotE | yqfD | DJ90_5714 | DJ90_645 | Spore coat protein E. | spore_yqfD: sporulation protein YqfD. | 0.496 |
dpaA | DJ90_2414 | DJ90_2589 | DJ90_2414 | spore_dpaA: dipicolinic acid synthetase, A subunit. | Hypothetical protein. | 0.661 |
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