Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DJ90_2641 | DJ90_2950 | Integrase core domain protein. | Transposase family protein. | 0.717 |
DJ90_2945 | DJ90_2948 | ftsK/SpoIIIE family protein. | ftsK/SpoIIIE family protein. | 0.825 |
DJ90_2945 | DJ90_2949 | ftsK/SpoIIIE family protein. | Hypothetical protein. | 0.746 |
DJ90_2945 | DJ90_2950 | ftsK/SpoIIIE family protein. | Transposase family protein. | 0.494 |
DJ90_2945 | DJ90_2951 | ftsK/SpoIIIE family protein. | Integrase core domain protein. | 0.408 |
DJ90_2948 | DJ90_2945 | ftsK/SpoIIIE family protein. | ftsK/SpoIIIE family protein. | 0.825 |
DJ90_2948 | DJ90_2949 | ftsK/SpoIIIE family protein. | Hypothetical protein. | 0.773 |
DJ90_2948 | DJ90_2950 | ftsK/SpoIIIE family protein. | Transposase family protein. | 0.510 |
DJ90_2948 | DJ90_2951 | ftsK/SpoIIIE family protein. | Integrase core domain protein. | 0.420 |
DJ90_2949 | DJ90_2945 | Hypothetical protein. | ftsK/SpoIIIE family protein. | 0.746 |
DJ90_2949 | DJ90_2948 | Hypothetical protein. | ftsK/SpoIIIE family protein. | 0.773 |
DJ90_2949 | DJ90_2950 | Hypothetical protein. | Transposase family protein. | 0.510 |
DJ90_2949 | DJ90_2951 | Hypothetical protein. | Integrase core domain protein. | 0.420 |
DJ90_2950 | DJ90_2641 | Transposase family protein. | Integrase core domain protein. | 0.717 |
DJ90_2950 | DJ90_2945 | Transposase family protein. | ftsK/SpoIIIE family protein. | 0.494 |
DJ90_2950 | DJ90_2948 | Transposase family protein. | ftsK/SpoIIIE family protein. | 0.510 |
DJ90_2950 | DJ90_2949 | Transposase family protein. | Hypothetical protein. | 0.510 |
DJ90_2950 | DJ90_2951 | Transposase family protein. | Integrase core domain protein. | 0.899 |
DJ90_2950 | DJ90_366 | Transposase family protein. | Integrase core domain protein. | 0.717 |
DJ90_2950 | DJ90_41 | Transposase family protein. | Integrase core domain protein. | 0.717 |
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