Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DJ90_3003HD domain protein. (348 aa)    
Predicted Functional Partners:
DJ90_3562
GGDEF: diguanylate cyclase domain protein.
 
 
 0.753
DJ90_204
GGDEF: diguanylate cyclase domain protein.
 
 
 0.750
DJ90_1146
GGDEF: diguanylate cyclase domain protein.
  
   0.730
DJ90_4672
GGDEF: diguanylate cyclase domain protein.
  
   
 0.722
DJ90_4534
GGDEF: diguanylate cyclase domain protein.
 
   0.719
DJ90_4776
GGDEF: diguanylate cyclase domain protein.
  
 
 0.718
DJ90_5915
GGDEF: diguanylate cyclase domain protein.
  
   0.704
DJ90_3290
GGDEF: diguanylate cyclase domain protein.
  
   0.702
DJ90_3002
thiS family protein.
       0.696
DJ90_2193
GGDEF: diguanylate cyclase domain protein.
  
   0.689
Your Current Organism:
Paenibacillus macerans
NCBI taxonomy Id: 44252
Other names: ATCC 8244, Aerobacillus macerans, BCRC 14680, Bacillus macerans, Bactrillum macerans, CCM 2012, CCRC 14680, CCRC:14680, CCUG 7423, CFBP 4253, CIP 66.19, DSM 24, HAMBI 636, IAM 12467, IFO 15307, JCM 2500, LMG 13281, LMG 6324, LMG:13281, LMG:6324, NBRC 15307, NCCB 48019, NCIB 9368, NCIMB 9368, NCTC 6355, NRRL B-172, NRRL B-394, NRRL B-4267, P. macerans, VKM B-506, Zymobacillus macerans
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.