Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DJ90_3584 | DJ90_3970 | DJ90_3584 | DJ90_3970 | Homocysteine S-methyltransferase family protein. | Pyridoxal-phosphate dependent enzyme family protein. | 0.580 |
| DJ90_3584 | ilvA | DJ90_3584 | DJ90_310 | Homocysteine S-methyltransferase family protein. | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.931 |
| DJ90_3584 | ilvD | DJ90_3584 | DJ90_2433 | Homocysteine S-methyltransferase family protein. | ilvD: dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. | 0.435 |
| DJ90_3584 | ilvN | DJ90_3584 | DJ90_3364 | Homocysteine S-methyltransferase family protein. | Acolac_sm: acetolactate synthase, small subunit. | 0.766 |
| DJ90_3584 | leuB | DJ90_3584 | DJ90_3362 | Homocysteine S-methyltransferase family protein. | 3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. | 0.450 |
| DJ90_3584 | metH | DJ90_3584 | DJ90_4992 | Homocysteine S-methyltransferase family protein. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.999 |
| DJ90_3584 | thrC | DJ90_3584 | DJ90_5816 | Homocysteine S-methyltransferase family protein. | Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | 0.580 |
| DJ90_3970 | DJ90_3584 | DJ90_3970 | DJ90_3584 | Pyridoxal-phosphate dependent enzyme family protein. | Homocysteine S-methyltransferase family protein. | 0.580 |
| DJ90_3970 | ilvA | DJ90_3970 | DJ90_310 | Pyridoxal-phosphate dependent enzyme family protein. | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.933 |
| DJ90_3970 | ilvD | DJ90_3970 | DJ90_2433 | Pyridoxal-phosphate dependent enzyme family protein. | ilvD: dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. | 0.448 |
| DJ90_3970 | ilvN | DJ90_3970 | DJ90_3364 | Pyridoxal-phosphate dependent enzyme family protein. | Acolac_sm: acetolactate synthase, small subunit. | 0.635 |
| DJ90_3970 | leuB | DJ90_3970 | DJ90_3362 | Pyridoxal-phosphate dependent enzyme family protein. | 3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. | 0.430 |
| DJ90_3970 | metH | DJ90_3970 | DJ90_4992 | Pyridoxal-phosphate dependent enzyme family protein. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.555 |
| ilvA | DJ90_3584 | DJ90_310 | DJ90_3584 | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | Homocysteine S-methyltransferase family protein. | 0.931 |
| ilvA | DJ90_3970 | DJ90_310 | DJ90_3970 | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | Pyridoxal-phosphate dependent enzyme family protein. | 0.933 |
| ilvA | ilvB | DJ90_310 | DJ90_2795 | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | Acolac_lg: acetolactate synthase, large subunit, biosynthetic type. | 0.966 |
| ilvA | ilvB-2 | DJ90_310 | DJ90_3365 | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | Acolac_lg: acetolactate synthase, large subunit, biosynthetic type. | 0.976 |
| ilvA | ilvD | DJ90_310 | DJ90_2433 | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | ilvD: dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. | 0.939 |
| ilvA | ilvN | DJ90_310 | DJ90_3364 | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | Acolac_sm: acetolactate synthase, small subunit. | 0.986 |
| ilvA | leuB | DJ90_310 | DJ90_3362 | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. | 0.942 |
page 1 of 4