Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DJ90_3125 | DJ90_350 | DJ90_3125 | DJ90_350 | merR regulatory family protein. | Hypothetical protein. | 0.502 |
| DJ90_3125 | DJ90_3714 | DJ90_3125 | DJ90_3714 | merR regulatory family protein. | GGDEF: diguanylate cyclase domain protein. | 0.538 |
| DJ90_3125 | DJ90_4678 | DJ90_3125 | DJ90_4678 | merR regulatory family protein. | Hypothetical protein. | 0.643 |
| DJ90_3125 | DJ90_817 | DJ90_3125 | DJ90_817 | merR regulatory family protein. | dnaJ domain protein. | 0.509 |
| DJ90_3125 | DJ90_912 | DJ90_3125 | DJ90_912 | merR regulatory family protein. | Hypothetical protein. | 0.502 |
| DJ90_3125 | dnaJ | DJ90_3125 | DJ90_620 | merR regulatory family protein. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.509 |
| DJ90_3125 | gltB | DJ90_3125 | DJ90_4517 | merR regulatory family protein. | Ferredoxin-dependent glutamate synthase 1. | 0.731 |
| DJ90_3125 | rpoB | DJ90_3125 | DJ90_5577 | merR regulatory family protein. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.532 |
| DJ90_3125 | rpoC | DJ90_3125 | DJ90_5578 | merR regulatory family protein. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.495 |
| DJ90_3125 | rpoZ | DJ90_3125 | DJ90_3588 | merR regulatory family protein. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.495 |
| DJ90_350 | DJ90_3125 | DJ90_350 | DJ90_3125 | Hypothetical protein. | merR regulatory family protein. | 0.502 |
| DJ90_3714 | DJ90_3125 | DJ90_3714 | DJ90_3125 | GGDEF: diguanylate cyclase domain protein. | merR regulatory family protein. | 0.538 |
| DJ90_3714 | DJ90_4678 | DJ90_3714 | DJ90_4678 | GGDEF: diguanylate cyclase domain protein. | Hypothetical protein. | 0.995 |
| DJ90_4678 | DJ90_3125 | DJ90_4678 | DJ90_3125 | Hypothetical protein. | merR regulatory family protein. | 0.643 |
| DJ90_4678 | DJ90_3714 | DJ90_4678 | DJ90_3714 | Hypothetical protein. | GGDEF: diguanylate cyclase domain protein. | 0.995 |
| DJ90_4678 | gltB | DJ90_4678 | DJ90_4517 | Hypothetical protein. | Ferredoxin-dependent glutamate synthase 1. | 0.704 |
| DJ90_817 | DJ90_3125 | DJ90_817 | DJ90_3125 | dnaJ domain protein. | merR regulatory family protein. | 0.509 |
| DJ90_912 | DJ90_3125 | DJ90_912 | DJ90_3125 | Hypothetical protein. | merR regulatory family protein. | 0.502 |
| dnaJ | DJ90_3125 | DJ90_620 | DJ90_3125 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | merR regulatory family protein. | 0.509 |
| dnaJ | rpoB | DJ90_620 | DJ90_5577 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.527 |
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