Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DJ90_3061 | DJ90_3234 | DJ90_3061 | DJ90_3234 | Asp23 family protein. | Hypothetical protein. | 0.739 |
DJ90_3061 | DJ90_3319 | DJ90_3061 | DJ90_3319 | Asp23 family protein. | ytxC-like family protein. | 0.478 |
DJ90_3061 | DJ90_3342 | DJ90_3061 | DJ90_3342 | Asp23 family protein. | Hypothetical protein. | 0.741 |
DJ90_3061 | DJ90_4397 | DJ90_3061 | DJ90_4397 | Asp23 family protein. | Hypothetical protein. | 0.623 |
DJ90_3061 | DJ90_723 | DJ90_3061 | DJ90_723 | Asp23 family protein. | Hypothetical protein. | 0.762 |
DJ90_3234 | DJ90_3061 | DJ90_3234 | DJ90_3061 | Hypothetical protein. | Asp23 family protein. | 0.739 |
DJ90_3234 | DJ90_3342 | DJ90_3234 | DJ90_3342 | Hypothetical protein. | Hypothetical protein. | 0.700 |
DJ90_3234 | DJ90_4397 | DJ90_3234 | DJ90_4397 | Hypothetical protein. | Hypothetical protein. | 0.661 |
DJ90_3234 | DJ90_723 | DJ90_3234 | DJ90_723 | Hypothetical protein. | Hypothetical protein. | 0.611 |
DJ90_3234 | DJ90_773 | DJ90_3234 | DJ90_773 | Hypothetical protein. | pspC domain protein. | 0.441 |
DJ90_3319 | DJ90_3061 | DJ90_3319 | DJ90_3061 | ytxC-like family protein. | Asp23 family protein. | 0.478 |
DJ90_3319 | DJ90_3342 | DJ90_3319 | DJ90_3342 | ytxC-like family protein. | Hypothetical protein. | 0.697 |
DJ90_3319 | DJ90_723 | DJ90_3319 | DJ90_723 | ytxC-like family protein. | Hypothetical protein. | 0.718 |
DJ90_3340 | DJ90_3342 | DJ90_3340 | DJ90_3342 | Hypothetical protein. | Hypothetical protein. | 0.723 |
DJ90_3340 | DJ90_3343 | DJ90_3340 | DJ90_3343 | Hypothetical protein. | Cytochrome C oxidase subunit II, periplasmic domain protein. | 0.641 |
DJ90_3340 | mutS2 | DJ90_3340 | DJ90_3341 | Hypothetical protein. | MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | 0.834 |
DJ90_3342 | DJ90_3061 | DJ90_3342 | DJ90_3061 | Hypothetical protein. | Asp23 family protein. | 0.741 |
DJ90_3342 | DJ90_3234 | DJ90_3342 | DJ90_3234 | Hypothetical protein. | Hypothetical protein. | 0.700 |
DJ90_3342 | DJ90_3319 | DJ90_3342 | DJ90_3319 | Hypothetical protein. | ytxC-like family protein. | 0.697 |
DJ90_3342 | DJ90_3340 | DJ90_3342 | DJ90_3340 | Hypothetical protein. | Hypothetical protein. | 0.723 |
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