STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ90_3838acyl-CoA reductase family protein. (401 aa)    
Predicted Functional Partners:
DJ90_3837
Acyl-synthetase, LuxE family protein.
 
 
 0.979
DJ90_3836
AMP-binding enzyme family protein.
 
 0.971
DJ90_3835
Phosphopantetheine attachment site family protein.
 
  
 0.928
gltB
Ferredoxin-dependent glutamate synthase 1.
  
 
 0.867
DJ90_5725
FAD binding domain protein.
   
 0.808
pyk
Pyruv_kin: pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.795
porC
Pyruvate synthase subunit porC domain protein.
     
 0.754
DJ90_4379
Hydrolyase, tartrate alpha subunit/fumarate, Fe-S type domain protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
   
 
 0.753
serA
PGDH: phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 0.747
DJ90_2630
Hypothetical protein; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein.
   
 0.717
Your Current Organism:
Paenibacillus macerans
NCBI taxonomy Id: 44252
Other names: ATCC 8244, Aerobacillus macerans, BCRC 14680, Bacillus macerans, Bactrillum macerans, CCM 2012, CCRC 14680, CCRC:14680, CCUG 7423, CFBP 4253, CIP 66.19, DSM 24, HAMBI 636, IAM 12467, IFO 15307, JCM 2500, LMG 13281, LMG 6324, LMG:13281, LMG:6324, NBRC 15307, NCCB 48019, NCIB 9368, NCIMB 9368, NCTC 6355, NRRL B-172, NRRL B-394, NRRL B-4267, P. macerans, VKM B-506, Zymobacillus macerans
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