Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DJ90_3002 | DJ90_3988 | DJ90_3002 | DJ90_3988 | thiS family protein. | xdhC and CoxI family protein. | 0.738 |
DJ90_3002 | DJ90_3989 | DJ90_3002 | DJ90_3989 | thiS family protein. | mobA-like NTP transferase domain protein. | 0.623 |
DJ90_3002 | DJ90_4927 | DJ90_3002 | DJ90_4927 | thiS family protein. | Molybdenum cofactor synthesis domain protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family. | 0.999 |
DJ90_3002 | DJ90_5133 | DJ90_3002 | DJ90_5133 | thiS family protein. | Molybdopterin-binding domain of aldehyde dehydrogenase family protein. | 0.650 |
DJ90_3002 | DJ90_5135 | DJ90_3002 | DJ90_5135 | thiS family protein. | [2Fe-2S] binding domain protein. | 0.674 |
DJ90_3002 | fdhD | DJ90_3002 | DJ90_2818 | thiS family protein. | Formate dehydrogenase family accessory protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.725 |
DJ90_3002 | mobA | DJ90_3002 | DJ90_5366 | thiS family protein. | mobA-like NTP transferase domain protein; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor. | 0.946 |
DJ90_3002 | modA | DJ90_3002 | DJ90_2114 | thiS family protein. | modA: molybdate ABC transporter, periplasmic molybdate-binding protein. | 0.840 |
DJ90_3988 | DJ90_3002 | DJ90_3988 | DJ90_3002 | xdhC and CoxI family protein. | thiS family protein. | 0.738 |
DJ90_3988 | DJ90_3989 | DJ90_3988 | DJ90_3989 | xdhC and CoxI family protein. | mobA-like NTP transferase domain protein. | 0.990 |
DJ90_3988 | DJ90_3990 | DJ90_3988 | DJ90_3990 | xdhC and CoxI family protein. | Hypothetical protein. | 0.639 |
DJ90_3988 | DJ90_4927 | DJ90_3988 | DJ90_4927 | xdhC and CoxI family protein. | Molybdenum cofactor synthesis domain protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family. | 0.724 |
DJ90_3988 | DJ90_5133 | DJ90_3988 | DJ90_5133 | xdhC and CoxI family protein. | Molybdopterin-binding domain of aldehyde dehydrogenase family protein. | 0.953 |
DJ90_3988 | DJ90_5134 | DJ90_3988 | DJ90_5134 | xdhC and CoxI family protein. | FAD binding domain in molybdopterin dehydrogenase family protein. | 0.959 |
DJ90_3988 | DJ90_5135 | DJ90_3988 | DJ90_5135 | xdhC and CoxI family protein. | [2Fe-2S] binding domain protein. | 0.953 |
DJ90_3988 | fdhD | DJ90_3988 | DJ90_2818 | xdhC and CoxI family protein. | Formate dehydrogenase family accessory protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.462 |
DJ90_3988 | mobA | DJ90_3988 | DJ90_5366 | xdhC and CoxI family protein. | mobA-like NTP transferase domain protein; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor. | 0.584 |
DJ90_3988 | modA | DJ90_3988 | DJ90_2114 | xdhC and CoxI family protein. | modA: molybdate ABC transporter, periplasmic molybdate-binding protein. | 0.481 |
DJ90_3989 | DJ90_3002 | DJ90_3989 | DJ90_3002 | mobA-like NTP transferase domain protein. | thiS family protein. | 0.623 |
DJ90_3989 | DJ90_3988 | DJ90_3989 | DJ90_3988 | mobA-like NTP transferase domain protein. | xdhC and CoxI family protein. | 0.990 |
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