STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ90_404N-acetylmuramoyl-L-alanine amidase family protein. (142 aa)    
Predicted Functional Partners:
DJ90_1593
Putative peptidoglycan binding domain protein.
    
 0.890
cinA
Hypothetical protein; cinA_cterm: competence/damage-inducible CinA C-terminal domain protein; Belongs to the CinA family.
 
 
  0.890
DJ90_411
Putative peptidoglycan binding domain protein.
    
 0.890
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.865
ysxC
Ribosome biogenesis GTP-binding protein YsxC; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
  
    0.845
DJ90_3557
Penicillin binding transpeptidase domain protein.
 
 
 0.810
ctpB
Carboxy-terminal processing protease CtpB; Belongs to the peptidase S41A family.
  
 
 0.795
DJ90_5007
PBP_1a_fam: penicillin-binding, 1A family protein.
   
 0.783
DJ90_6483
PBP_1a_fam: penicillin-binding, 1A family protein.
   
 0.783
DJ90_5119
Cell wall binding repeat 2 family protein.
  
 
  0.778
Your Current Organism:
Paenibacillus macerans
NCBI taxonomy Id: 44252
Other names: ATCC 8244, Aerobacillus macerans, BCRC 14680, Bacillus macerans, Bactrillum macerans, CCM 2012, CCRC 14680, CCRC:14680, CCUG 7423, CFBP 4253, CIP 66.19, DSM 24, HAMBI 636, IAM 12467, IFO 15307, JCM 2500, LMG 13281, LMG 6324, LMG:13281, LMG:6324, NBRC 15307, NCCB 48019, NCIB 9368, NCIMB 9368, NCTC 6355, NRRL B-172, NRRL B-394, NRRL B-4267, P. macerans, VKM B-506, Zymobacillus macerans
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