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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ90_4091Ferric iron reductase FhuF-like transporter family protein. (577 aa)    
Predicted Functional Partners:
DJ90_4094
Hypothetical protein; Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
 
 
 0.989
DJ90_4092
Ferric iron reductase FhuF-like transporter family protein.
  
0.983
DJ90_4095
Ferric iron reductase FhuF-like transporter family protein.
  
0.977
DJ90_4090
Dat: 2,4-diaminobutyrate 4-transaminase family protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.899
DJ90_4093
hpcH/HpaI aldolase/citrate lyase family protein; Belongs to the HpcH/HpaI aldolase family.
 
    0.892
DJ90_1385
Alpha/beta hydrolase family protein.
  
     0.682
DJ90_425
F5/8 type C domain protein.
  
     0.633
DJ90_4088
Ferric iron reductase FhuF-like transporter family protein.
 
  
 0.624
DJ90_4089
Prokaryotic glutathione synthetase, ATP-grasp domain protein.
       0.622
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
  
 
 0.588
Your Current Organism:
Paenibacillus macerans
NCBI taxonomy Id: 44252
Other names: ATCC 8244, Aerobacillus macerans, BCRC 14680, Bacillus macerans, Bactrillum macerans, CCM 2012, CCRC 14680, CCRC:14680, CCUG 7423, CFBP 4253, CIP 66.19, DSM 24, HAMBI 636, IAM 12467, IFO 15307, JCM 2500, LMG 13281, LMG 6324, LMG:13281, LMG:6324, NBRC 15307, NCCB 48019, NCIB 9368, NCIMB 9368, NCTC 6355, NRRL B-172, NRRL B-394, NRRL B-4267, P. macerans, VKM B-506, Zymobacillus macerans
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