Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DJ90_1797 | DJ90_3641 | DJ90_1797 | DJ90_3641 | Tartro_sem_red: 2-hydroxy-3-oxopropionate reductase. | Aldehyde dehydrogenase family protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | 0.638 |
DJ90_1797 | DJ90_4166 | DJ90_1797 | DJ90_4166 | Tartro_sem_red: 2-hydroxy-3-oxopropionate reductase. | Bacterial transcriptional regulator family protein. | 0.445 |
DJ90_2208 | DJ90_4166 | DJ90_2208 | DJ90_4166 | Bacterial regulatory s, gntR family protein. | Bacterial transcriptional regulator family protein. | 0.505 |
DJ90_3641 | DJ90_1797 | DJ90_3641 | DJ90_1797 | Aldehyde dehydrogenase family protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | Tartro_sem_red: 2-hydroxy-3-oxopropionate reductase. | 0.638 |
DJ90_3641 | DJ90_3986 | DJ90_3641 | DJ90_3986 | Aldehyde dehydrogenase family protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | Hypothetical protein. | 0.479 |
DJ90_3641 | DJ90_4166 | DJ90_3641 | DJ90_4166 | Aldehyde dehydrogenase family protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | Bacterial transcriptional regulator family protein. | 0.532 |
DJ90_3641 | kipI | DJ90_3641 | DJ90_3985 | Aldehyde dehydrogenase family protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | Kinase A inhibitor. | 0.458 |
DJ90_3986 | DJ90_3641 | DJ90_3986 | DJ90_3641 | Hypothetical protein. | Aldehyde dehydrogenase family protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | 0.479 |
DJ90_3986 | DJ90_4166 | DJ90_3986 | DJ90_4166 | Hypothetical protein. | Bacterial transcriptional regulator family protein. | 0.689 |
DJ90_3986 | kipI | DJ90_3986 | DJ90_3985 | Hypothetical protein. | Kinase A inhibitor. | 0.999 |
DJ90_4166 | DJ90_1797 | DJ90_4166 | DJ90_1797 | Bacterial transcriptional regulator family protein. | Tartro_sem_red: 2-hydroxy-3-oxopropionate reductase. | 0.445 |
DJ90_4166 | DJ90_2208 | DJ90_4166 | DJ90_2208 | Bacterial transcriptional regulator family protein. | Bacterial regulatory s, gntR family protein. | 0.505 |
DJ90_4166 | DJ90_3641 | DJ90_4166 | DJ90_3641 | Bacterial transcriptional regulator family protein. | Aldehyde dehydrogenase family protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | 0.532 |
DJ90_4166 | DJ90_3986 | DJ90_4166 | DJ90_3986 | Bacterial transcriptional regulator family protein. | Hypothetical protein. | 0.689 |
DJ90_4166 | DJ90_4167 | DJ90_4166 | DJ90_4167 | Bacterial transcriptional regulator family protein. | phospholipase/Carboxylesterase family protein. | 0.683 |
DJ90_4166 | DJ90_4168 | DJ90_4166 | DJ90_4168 | Bacterial transcriptional regulator family protein. | Iron/manganese superoxide dismutase, alpha-hairpin domain protein. | 0.646 |
DJ90_4166 | DJ90_5048 | DJ90_4166 | DJ90_5048 | Bacterial transcriptional regulator family protein. | Bacterial regulatory s, gntR family protein. | 0.620 |
DJ90_4166 | DJ90_5927 | DJ90_4166 | DJ90_5927 | Bacterial transcriptional regulator family protein. | Helix-turn-helix family protein. | 0.451 |
DJ90_4166 | DJ90_88 | DJ90_4166 | DJ90_88 | Bacterial transcriptional regulator family protein. | Bacterial regulatory s, gntR family protein. | 0.531 |
DJ90_4166 | kipI | DJ90_4166 | DJ90_3985 | Bacterial transcriptional regulator family protein. | Kinase A inhibitor. | 0.700 |
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