Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DJ90_2223 | DJ90_452 | DJ90_2223 | DJ90_452 | Bacterial extracellular solute-binding family protein. | Bacterial regulatory, arsR family protein. | 0.401 |
DJ90_4444 | DJ90_452 | DJ90_4444 | DJ90_452 | Hypothetical protein. | Bacterial regulatory, arsR family protein. | 0.588 |
DJ90_4444 | DJ90_457 | DJ90_4444 | DJ90_457 | Hypothetical protein. | Glycosyl hydrolases 43 family protein; Belongs to the glycosyl hydrolase 43 family. | 0.558 |
DJ90_452 | DJ90_2223 | DJ90_452 | DJ90_2223 | Bacterial regulatory, arsR family protein. | Bacterial extracellular solute-binding family protein. | 0.401 |
DJ90_452 | DJ90_4444 | DJ90_452 | DJ90_4444 | Bacterial regulatory, arsR family protein. | Hypothetical protein. | 0.588 |
DJ90_452 | DJ90_454 | DJ90_452 | DJ90_454 | Bacterial regulatory, arsR family protein. | Bacterial extracellular solute-binding family protein. | 0.568 |
DJ90_452 | DJ90_457 | DJ90_452 | DJ90_457 | Bacterial regulatory, arsR family protein. | Glycosyl hydrolases 43 family protein; Belongs to the glycosyl hydrolase 43 family. | 0.423 |
DJ90_452 | DJ90_460 | DJ90_452 | DJ90_460 | Bacterial regulatory, arsR family protein. | Bacterial extracellular solute-binding family protein. | 0.404 |
DJ90_452 | DJ90_470 | DJ90_452 | DJ90_470 | Bacterial regulatory, arsR family protein. | Bacterial extracellular solute-binding family protein. | 0.402 |
DJ90_452 | abfA | DJ90_452 | DJ90_453 | Bacterial regulatory, arsR family protein. | alpha-N-arabinofuranosidase. | 0.679 |
DJ90_454 | DJ90_452 | DJ90_454 | DJ90_452 | Bacterial extracellular solute-binding family protein. | Bacterial regulatory, arsR family protein. | 0.568 |
DJ90_454 | DJ90_457 | DJ90_454 | DJ90_457 | Bacterial extracellular solute-binding family protein. | Glycosyl hydrolases 43 family protein; Belongs to the glycosyl hydrolase 43 family. | 0.511 |
DJ90_454 | abfA | DJ90_454 | DJ90_453 | Bacterial extracellular solute-binding family protein. | alpha-N-arabinofuranosidase. | 0.955 |
DJ90_457 | DJ90_4444 | DJ90_457 | DJ90_4444 | Glycosyl hydrolases 43 family protein; Belongs to the glycosyl hydrolase 43 family. | Hypothetical protein. | 0.558 |
DJ90_457 | DJ90_452 | DJ90_457 | DJ90_452 | Glycosyl hydrolases 43 family protein; Belongs to the glycosyl hydrolase 43 family. | Bacterial regulatory, arsR family protein. | 0.423 |
DJ90_457 | DJ90_454 | DJ90_457 | DJ90_454 | Glycosyl hydrolases 43 family protein; Belongs to the glycosyl hydrolase 43 family. | Bacterial extracellular solute-binding family protein. | 0.511 |
DJ90_457 | abfA | DJ90_457 | DJ90_453 | Glycosyl hydrolases 43 family protein; Belongs to the glycosyl hydrolase 43 family. | alpha-N-arabinofuranosidase. | 0.737 |
DJ90_460 | DJ90_452 | DJ90_460 | DJ90_452 | Bacterial extracellular solute-binding family protein. | Bacterial regulatory, arsR family protein. | 0.404 |
DJ90_470 | DJ90_452 | DJ90_470 | DJ90_452 | Bacterial extracellular solute-binding family protein. | Bacterial regulatory, arsR family protein. | 0.402 |
abfA | DJ90_452 | DJ90_453 | DJ90_452 | alpha-N-arabinofuranosidase. | Bacterial regulatory, arsR family protein. | 0.679 |
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