Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DJ90_2783 | DJ90_4719 | DJ90_2783 | DJ90_4719 | Hypothetical protein; Glycosyl hydrolase family 65, N-terminal domain protein. | Hypothetical protein. | 0.777 |
DJ90_2783 | DJ90_5975 | DJ90_2783 | DJ90_5975 | Hypothetical protein; Glycosyl hydrolase family 65, N-terminal domain protein. | Hypothetical protein. | 0.478 |
DJ90_2783 | pelA | DJ90_2783 | DJ90_117 | Hypothetical protein; Glycosyl hydrolase family 65, N-terminal domain protein. | Pectate lyase A. | 0.455 |
DJ90_2783 | pelA-2 | DJ90_2783 | DJ90_531 | Hypothetical protein; Glycosyl hydrolase family 65, N-terminal domain protein. | Pec_lyase: pectate lyase. | 0.571 |
DJ90_2783 | rhgT | DJ90_2783 | DJ90_2477 | Hypothetical protein; Glycosyl hydrolase family 65, N-terminal domain protein. | Rhamnogalacturonan acetylesterase rhgT. | 0.738 |
DJ90_2783 | xynA | DJ90_2783 | DJ90_1317 | Hypothetical protein; Glycosyl hydrolase family 65, N-terminal domain protein. | Endo-1,4-beta-xylanase A. | 0.820 |
DJ90_2783 | yesW | DJ90_2783 | DJ90_1758 | Hypothetical protein; Glycosyl hydrolase family 65, N-terminal domain protein. | Rhamnogalacturonan lyase yesW. | 0.664 |
DJ90_471 | DJ90_4719 | DJ90_471 | DJ90_4719 | BH0842 protein. | Hypothetical protein. | 0.733 |
DJ90_471 | pelA | DJ90_471 | DJ90_117 | BH0842 protein. | Pectate lyase A. | 0.431 |
DJ90_471 | pelA-2 | DJ90_471 | DJ90_531 | BH0842 protein. | Pec_lyase: pectate lyase. | 0.570 |
DJ90_471 | rhgT | DJ90_471 | DJ90_2477 | BH0842 protein. | Rhamnogalacturonan acetylesterase rhgT. | 0.740 |
DJ90_471 | xynA | DJ90_471 | DJ90_1317 | BH0842 protein. | Endo-1,4-beta-xylanase A. | 0.813 |
DJ90_471 | yesW | DJ90_471 | DJ90_1758 | BH0842 protein. | Rhamnogalacturonan lyase yesW. | 0.672 |
DJ90_4719 | DJ90_2783 | DJ90_4719 | DJ90_2783 | Hypothetical protein. | Hypothetical protein; Glycosyl hydrolase family 65, N-terminal domain protein. | 0.777 |
DJ90_4719 | DJ90_471 | DJ90_4719 | DJ90_471 | Hypothetical protein. | BH0842 protein. | 0.733 |
DJ90_4719 | DJ90_4720 | DJ90_4719 | DJ90_4720 | Hypothetical protein. | Polysaccharide deacetylase family protein. | 0.828 |
DJ90_4719 | DJ90_4723 | DJ90_4719 | DJ90_4723 | Hypothetical protein. | Hypothetical protein. | 0.887 |
DJ90_4719 | DJ90_5975 | DJ90_4719 | DJ90_5975 | Hypothetical protein. | Hypothetical protein. | 0.791 |
DJ90_4719 | pelA | DJ90_4719 | DJ90_117 | Hypothetical protein. | Pectate lyase A. | 0.778 |
DJ90_4719 | pelA-2 | DJ90_4719 | DJ90_531 | Hypothetical protein. | Pec_lyase: pectate lyase. | 0.754 |
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