Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DJ90_485 | DJ90_486 | DJ90_485 | DJ90_486 | AAA domain family protein. | Hypothetical protein. | 0.923 |
DJ90_485 | DJ90_488 | DJ90_485 | DJ90_488 | AAA domain family protein. | HAD-SF-IA-v1: HAD hydrolase, IA, variant 1 family protein. | 0.717 |
DJ90_485 | DJ90_491 | DJ90_485 | DJ90_491 | AAA domain family protein. | CRS1 / YhbY domain protein. | 0.672 |
DJ90_485 | DJ90_493 | DJ90_485 | DJ90_493 | AAA domain family protein. | BH1327 protein. | 0.659 |
DJ90_485 | DJ90_495 | DJ90_485 | DJ90_495 | AAA domain family protein. | S1 RNA binding domain protein; Belongs to the CvfB family. | 0.659 |
DJ90_485 | DJ90_496 | DJ90_485 | DJ90_496 | AAA domain family protein. | Methyltransferase type 12. | 0.467 |
DJ90_485 | aroE | DJ90_485 | DJ90_490 | AAA domain family protein. | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.699 |
DJ90_485 | nadD | DJ90_485 | DJ90_492 | AAA domain family protein. | Nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.659 |
DJ90_485 | rsfS | DJ90_485 | DJ90_494 | AAA domain family protein. | Hypothetical protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.671 |
DJ90_485 | yqeH | DJ90_485 | DJ90_489 | AAA domain family protein. | GTPase_YqeH: ribosome biogenesis GTPase YqeH. | 0.717 |
DJ90_486 | DJ90_485 | DJ90_486 | DJ90_485 | Hypothetical protein. | AAA domain family protein. | 0.923 |
DJ90_486 | DJ90_488 | DJ90_486 | DJ90_488 | Hypothetical protein. | HAD-SF-IA-v1: HAD hydrolase, IA, variant 1 family protein. | 0.717 |
DJ90_486 | DJ90_491 | DJ90_486 | DJ90_491 | Hypothetical protein. | CRS1 / YhbY domain protein. | 0.672 |
DJ90_486 | DJ90_493 | DJ90_486 | DJ90_493 | Hypothetical protein. | BH1327 protein. | 0.659 |
DJ90_486 | DJ90_495 | DJ90_486 | DJ90_495 | Hypothetical protein. | S1 RNA binding domain protein; Belongs to the CvfB family. | 0.659 |
DJ90_486 | DJ90_496 | DJ90_486 | DJ90_496 | Hypothetical protein. | Methyltransferase type 12. | 0.571 |
DJ90_486 | aroE | DJ90_486 | DJ90_490 | Hypothetical protein. | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.697 |
DJ90_486 | nadD | DJ90_486 | DJ90_492 | Hypothetical protein. | Nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.697 |
DJ90_486 | rsfS | DJ90_486 | DJ90_494 | Hypothetical protein. | Hypothetical protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.659 |
DJ90_486 | yqeH | DJ90_486 | DJ90_489 | Hypothetical protein. | GTPase_YqeH: ribosome biogenesis GTPase YqeH. | 0.717 |
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