Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DJ90_3308 | DJ90_5542 | Hypothetical protein. | Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. | 0.604 |
DJ90_3899 | DJ90_5542 | Hypothetical protein. | Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. | 0.604 |
DJ90_5165 | DJ90_5542 | Hypothetical protein. | Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. | 0.604 |
DJ90_5528 | DJ90_5542 | Cysteine-rich secretory family protein. | Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. | 0.605 |
DJ90_5539 | DJ90_5540 | Hypothetical protein. | ABC transporter family protein. | 0.773 |
DJ90_5539 | DJ90_5541 | Hypothetical protein. | ABC transporter family protein. | 0.773 |
DJ90_5539 | DJ90_5542 | Hypothetical protein. | Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. | 0.773 |
DJ90_5539 | DJ90_5543 | Hypothetical protein. | Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. | 0.768 |
DJ90_5539 | DJ90_5544 | Hypothetical protein. | Receptor ligand binding region family protein. | 0.653 |
DJ90_5540 | DJ90_5539 | ABC transporter family protein. | Hypothetical protein. | 0.773 |
DJ90_5540 | DJ90_5541 | ABC transporter family protein. | ABC transporter family protein. | 0.997 |
DJ90_5540 | DJ90_5542 | ABC transporter family protein. | Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. | 0.999 |
DJ90_5540 | DJ90_5543 | ABC transporter family protein. | Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. | 0.997 |
DJ90_5540 | DJ90_5544 | ABC transporter family protein. | Receptor ligand binding region family protein. | 0.997 |
DJ90_5541 | DJ90_5539 | ABC transporter family protein. | Hypothetical protein. | 0.773 |
DJ90_5541 | DJ90_5540 | ABC transporter family protein. | ABC transporter family protein. | 0.997 |
DJ90_5541 | DJ90_5542 | ABC transporter family protein. | Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. | 0.999 |
DJ90_5541 | DJ90_5543 | ABC transporter family protein. | Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. | 0.999 |
DJ90_5541 | DJ90_5544 | ABC transporter family protein. | Receptor ligand binding region family protein. | 0.999 |
DJ90_5542 | DJ90_3308 | Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family. | Hypothetical protein. | 0.604 |
page 1 of 2