Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DJ90_198 | DJ90_2175 | Hypothetical protein. | Putative fibronectin type III domain protein. | 0.750 |
DJ90_198 | DJ90_5479 | Hypothetical protein. | Phosphatase regulatory subunit. | 0.920 |
DJ90_198 | DJ90_6124 | Hypothetical protein. | Glycosyl transferases group 1 family protein. | 0.758 |
DJ90_2175 | DJ90_198 | Putative fibronectin type III domain protein. | Hypothetical protein. | 0.750 |
DJ90_2175 | DJ90_3615 | Putative fibronectin type III domain protein. | HEAT repeat family protein. | 0.774 |
DJ90_2175 | DJ90_3668 | Putative fibronectin type III domain protein. | Right handed beta helix region family protein. | 0.756 |
DJ90_2175 | DJ90_3683 | Putative fibronectin type III domain protein. | Right handed beta helix region family protein. | 0.771 |
DJ90_2175 | DJ90_4425 | Putative fibronectin type III domain protein. | Putative lipoprotein. | 0.760 |
DJ90_2175 | DJ90_4837 | Putative fibronectin type III domain protein. | Sensor family protein. | 0.766 |
DJ90_2175 | DJ90_5479 | Putative fibronectin type III domain protein. | Phosphatase regulatory subunit. | 0.795 |
DJ90_2175 | DJ90_6124 | Putative fibronectin type III domain protein. | Glycosyl transferases group 1 family protein. | 0.737 |
DJ90_3344 | DJ90_3683 | Hypothetical protein. | Right handed beta helix region family protein. | 0.564 |
DJ90_3344 | DJ90_4425 | Hypothetical protein. | Putative lipoprotein. | 0.504 |
DJ90_3344 | DJ90_4837 | Hypothetical protein. | Sensor family protein. | 0.544 |
DJ90_3344 | DJ90_5479 | Hypothetical protein. | Phosphatase regulatory subunit. | 0.620 |
DJ90_3344 | DJ90_6124 | Hypothetical protein. | Glycosyl transferases group 1 family protein. | 0.741 |
DJ90_3615 | DJ90_2175 | HEAT repeat family protein. | Putative fibronectin type III domain protein. | 0.774 |
DJ90_3615 | DJ90_3668 | HEAT repeat family protein. | Right handed beta helix region family protein. | 0.748 |
DJ90_3615 | DJ90_3683 | HEAT repeat family protein. | Right handed beta helix region family protein. | 0.771 |
DJ90_3615 | DJ90_4425 | HEAT repeat family protein. | Putative lipoprotein. | 0.762 |
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