Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DJ90_2226 | DJ90_6242 | HAMP domain protein. | Helix-turn-helix domain protein. | 0.872 |
DJ90_2289 | DJ90_6242 | HAMP domain protein. | Helix-turn-helix domain protein. | 0.880 |
DJ90_3 | DJ90_6242 | HAMP domain protein. | Helix-turn-helix domain protein. | 0.863 |
DJ90_3274 | DJ90_6242 | HAMP domain protein. | Helix-turn-helix domain protein. | 0.873 |
DJ90_3647 | DJ90_6242 | HAMP domain protein. | Helix-turn-helix domain protein. | 0.876 |
DJ90_3728 | DJ90_6242 | HAMP domain protein. | Helix-turn-helix domain protein. | 0.886 |
DJ90_3734 | DJ90_6242 | HAMP domain protein. | Helix-turn-helix domain protein. | 0.877 |
DJ90_4147 | DJ90_6242 | Histidine kinase family protein. | Helix-turn-helix domain protein. | 0.865 |
DJ90_467 | DJ90_6242 | HAMP domain protein. | Helix-turn-helix domain protein. | 0.864 |
DJ90_6242 | DJ90_2226 | Helix-turn-helix domain protein. | HAMP domain protein. | 0.872 |
DJ90_6242 | DJ90_2289 | Helix-turn-helix domain protein. | HAMP domain protein. | 0.880 |
DJ90_6242 | DJ90_3 | Helix-turn-helix domain protein. | HAMP domain protein. | 0.863 |
DJ90_6242 | DJ90_3274 | Helix-turn-helix domain protein. | HAMP domain protein. | 0.873 |
DJ90_6242 | DJ90_3647 | Helix-turn-helix domain protein. | HAMP domain protein. | 0.876 |
DJ90_6242 | DJ90_3728 | Helix-turn-helix domain protein. | HAMP domain protein. | 0.886 |
DJ90_6242 | DJ90_3734 | Helix-turn-helix domain protein. | HAMP domain protein. | 0.877 |
DJ90_6242 | DJ90_4147 | Helix-turn-helix domain protein. | Histidine kinase family protein. | 0.865 |
DJ90_6242 | DJ90_467 | Helix-turn-helix domain protein. | HAMP domain protein. | 0.864 |
DJ90_6242 | DJ90_6243 | Helix-turn-helix domain protein. | HAMP domain protein. | 0.982 |
DJ90_6243 | DJ90_6242 | HAMP domain protein. | Helix-turn-helix domain protein. | 0.982 |