Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DJ90_6630 | DJ90_6631 | Methyl-accepting chemotaxis (MCP) signaling domain protein. | GerA spore germination family protein. | 0.449 |
DJ90_6630 | DJ90_6632 | Methyl-accepting chemotaxis (MCP) signaling domain protein. | spore_ger_x_C: germination, Ger(x)C family protein. | 0.449 |
DJ90_6630 | DJ90_6633 | Methyl-accepting chemotaxis (MCP) signaling domain protein. | Hypothetical protein. | 0.449 |
DJ90_6631 | DJ90_6630 | GerA spore germination family protein. | Methyl-accepting chemotaxis (MCP) signaling domain protein. | 0.449 |
DJ90_6631 | DJ90_6632 | GerA spore germination family protein. | spore_ger_x_C: germination, Ger(x)C family protein. | 0.946 |
DJ90_6631 | DJ90_6633 | GerA spore germination family protein. | Hypothetical protein. | 0.773 |
DJ90_6631 | DJ90_6634 | GerA spore germination family protein. | 2A0309: spore germination family protein. | 0.847 |
DJ90_6631 | DJ90_6635 | GerA spore germination family protein. | uroporphyrinogen-III synthase HemD family protein. | 0.480 |
DJ90_6631 | DJ90_6636 | GerA spore germination family protein. | Hypothetical protein. | 0.403 |
DJ90_6632 | DJ90_6630 | spore_ger_x_C: germination, Ger(x)C family protein. | Methyl-accepting chemotaxis (MCP) signaling domain protein. | 0.449 |
DJ90_6632 | DJ90_6631 | spore_ger_x_C: germination, Ger(x)C family protein. | GerA spore germination family protein. | 0.946 |
DJ90_6632 | DJ90_6633 | spore_ger_x_C: germination, Ger(x)C family protein. | Hypothetical protein. | 0.816 |
DJ90_6632 | DJ90_6634 | spore_ger_x_C: germination, Ger(x)C family protein. | 2A0309: spore germination family protein. | 0.953 |
DJ90_6632 | DJ90_6635 | spore_ger_x_C: germination, Ger(x)C family protein. | uroporphyrinogen-III synthase HemD family protein. | 0.550 |
DJ90_6632 | DJ90_6636 | spore_ger_x_C: germination, Ger(x)C family protein. | Hypothetical protein. | 0.473 |
DJ90_6633 | DJ90_6630 | Hypothetical protein. | Methyl-accepting chemotaxis (MCP) signaling domain protein. | 0.449 |
DJ90_6633 | DJ90_6631 | Hypothetical protein. | GerA spore germination family protein. | 0.773 |
DJ90_6633 | DJ90_6632 | Hypothetical protein. | spore_ger_x_C: germination, Ger(x)C family protein. | 0.816 |
DJ90_6633 | DJ90_6634 | Hypothetical protein. | 2A0309: spore germination family protein. | 0.704 |
DJ90_6633 | DJ90_6635 | Hypothetical protein. | uroporphyrinogen-III synthase HemD family protein. | 0.521 |
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