Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DJ90_3342 | DJ90_773 | Hypothetical protein. | pspC domain protein. | 0.862 |
DJ90_5272 | DJ90_6263 | Hypothetical protein. | pspA/IM30 family protein. | 0.692 |
DJ90_5272 | DJ90_772 | Hypothetical protein. | pspA/IM30 family protein. | 0.780 |
DJ90_5272 | DJ90_773 | Hypothetical protein. | pspC domain protein. | 0.792 |
DJ90_5272 | DJ90_775 | Hypothetical protein. | Hypothetical protein. | 0.465 |
DJ90_5524 | DJ90_773 | pspA/IM30 family protein. | pspC domain protein. | 0.792 |
DJ90_5524 | DJ90_775 | pspA/IM30 family protein. | Hypothetical protein. | 0.465 |
DJ90_6263 | DJ90_5272 | pspA/IM30 family protein. | Hypothetical protein. | 0.692 |
DJ90_6263 | DJ90_773 | pspA/IM30 family protein. | pspC domain protein. | 0.790 |
DJ90_771 | DJ90_772 | Putative membrane protein. | pspA/IM30 family protein. | 0.767 |
DJ90_771 | DJ90_773 | Putative membrane protein. | pspC domain protein. | 0.767 |
DJ90_771 | DJ90_774 | Putative membrane protein. | pspA/IM30 family protein. | 0.767 |
DJ90_771 | DJ90_775 | Putative membrane protein. | Hypothetical protein. | 0.682 |
DJ90_771 | DJ90_776 | Putative membrane protein. | Histidine kinase family protein. | 0.671 |
DJ90_771 | DJ90_777 | Putative membrane protein. | Bacterial regulatory s, luxR family protein. | 0.649 |
DJ90_772 | DJ90_5272 | pspA/IM30 family protein. | Hypothetical protein. | 0.780 |
DJ90_772 | DJ90_771 | pspA/IM30 family protein. | Putative membrane protein. | 0.767 |
DJ90_772 | DJ90_773 | pspA/IM30 family protein. | pspC domain protein. | 0.972 |
DJ90_772 | DJ90_774 | pspA/IM30 family protein. | pspA/IM30 family protein. | 0.887 |
DJ90_772 | DJ90_775 | pspA/IM30 family protein. | Hypothetical protein. | 0.848 |
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