STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYD78156.1Thiosulfate reductase cytochrome B subunit (membrane anchoring protein). (266 aa)    
Predicted Functional Partners:
EYD78155.1
Sulfite oxidase; And related enzymes; COG2041.
 
 
  0.966
EYD73943.1
Fe-S-cluster-containing hydrogenase component 1.
   
 
 0.806
ilvD
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
       0.610
EYD78361.1
Thiosulfate sulfurtransferase, rhodanese.
    
  0.557
EYD76253.1
Hypothetical protein.
  
     0.472
EYD74796.1
Hypothetical protein.
 
 
  0.466
EYD76533.1
Putative sulfite oxidase.
 
 
  0.464
EYD78164.1
Anaerobic dimethyl sulfoxide reductase chain B.
   
 
 0.463
EYD73942.1
Molybdopterin oxidoreductase, iron-sulfur binding protein subunit.
   
 
 0.463
EYD76285.1
Putative sulfite oxidase; Overlaps another CDS with the same product name.
 
 
  0.461
Your Current Organism:
Rubellimicrobium mesophilum
NCBI taxonomy Id: 442562
Other names: R. mesophilum DSM 19309, Rubellimicrobium mesophilum DSM 19309, Rubellimicrobium sp. MSL-20
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