STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYD78101.1Hemoglobin-like protein HbO. (146 aa)    
Predicted Functional Partners:
EYD74339.1
Chemotaxis protein methyltransferase CheR.
    
  0.808
EYD74236.1
Chemotaxis protein methyltransferase CheR.
    
  0.782
EYD75080.1
Putative integral membrane protein.
 
 
   0.649
EYD75085.1
Hypothetical protein; Mlr7321.
  
     0.604
EYD75086.1
Flavodoxin reductase (ferredoxin-NADPH reductase) family 1, Vanillate O-demethylase oxidoreductase.
 
     0.578
EYD78100.1
Hypothetical protein; FIG00793527.
 
     0.548
EYD76417.1
Sarcosine oxidase alpha subunit; Belongs to the GcvT family.
 
     0.511
EYD75087.1
Hypothetical protein; FIG00986085.
  
     0.506
EYD78104.1
Succinyl-CoA ligase [ADP-forming] beta chain.
 
     0.484
EYD75081.1
Sarcosine oxidase alpha subunit; Belongs to the GcvT family.
 
     0.474
Your Current Organism:
Rubellimicrobium mesophilum
NCBI taxonomy Id: 442562
Other names: R. mesophilum DSM 19309, Rubellimicrobium mesophilum DSM 19309, Rubellimicrobium sp. MSL-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.