STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYD78104.1Succinyl-CoA ligase [ADP-forming] beta chain. (143 aa)    
Predicted Functional Partners:
EYD78107.1
Succinyl-CoA ligase [ADP-forming] alpha chain.
 
 0.998
sucD
Succinyl-CoA ligase [ADP-forming] alpha chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
 
 0.995
EYD78106.1
Succinyl-CoA ligase [ADP-forming] beta chain.
     0.991
EYD76260.1
Citrate synthase (si); Belongs to the citrate synthase family.
  
 0.963
EYD74432.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 0.911
EYD78103.1
Malyl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.884
EYD76472.1
2-oxoglutarate dehydrogenase E1 component.
 
 
 0.873
EYD76365.1
Glutamate synthase [NADPH] large chain.
   
 
 0.862
EYD76366.1
Glutamate synthase [NADPH] large chain.
   
 
 0.862
EYD78060.1
Succinate dehydrogenase cytochrome b-556 subunit.
  
 
 0.839
Your Current Organism:
Rubellimicrobium mesophilum
NCBI taxonomy Id: 442562
Other names: R. mesophilum DSM 19309, Rubellimicrobium mesophilum DSM 19309, Rubellimicrobium sp. MSL-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.