STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYD78047.1Pyridine nucleotide-disulfide oxidoreductase associated with reductive pyrimidine catabolism. (442 aa)    
Predicted Functional Partners:
EYD78046.1
Dihydropyrimidine dehydrogenase (NADP+).
 0.999
EYD76365.1
Glutamate synthase [NADPH] large chain.
 0.999
EYD76366.1
Glutamate synthase [NADPH] large chain.
 0.999
EYD75086.1
Flavodoxin reductase (ferredoxin-NADPH reductase) family 1, Vanillate O-demethylase oxidoreductase.
   
 0.980
EYD73905.1
Glutamate synthase [NADPH] large chain; Belongs to the glutamate synthase family.
 
 0.980
EYD74482.1
Ferredoxin, 2Fe-2S.
    
 0.972
EYD73906.1
Glutamate synthase [NADPH] putative GlxC chain.
  
 0.968
EYD73907.1
Glutamine amidotransferase protein GlxB.
  
 0.968
EYD74524.1
Electron transfer flavoprotein, beta subunit.
   
 
 0.930
EYD72946.1
Dihydropyrimidinase; Overlaps another CDS with the same product name.
 
 
 0.919
Your Current Organism:
Rubellimicrobium mesophilum
NCBI taxonomy Id: 442562
Other names: R. mesophilum DSM 19309, Rubellimicrobium mesophilum DSM 19309, Rubellimicrobium sp. MSL-20
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.