STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYD77510.1Putative Copper export protein. (152 aa)    
Predicted Functional Partners:
EYD77915.1
Hypothetical protein.
 
  
 0.989
EYD77104.1
Hypothetical protein.
 
  
 0.989
EYD72088.1
Copper metallochaperone, bacterial similar to Cox17 protein.
  
    0.770
EYD77509.1
Hypothetical protein.
       0.682
EYD77914.1
Hypothetical protein.
 
  
0.632
EYD78306.1
Hypothetical protein.
    
   0.570
EYD75286.1
Putative cytochrome c-552.
    
   0.570
EYD73938.1
ABC-type Fe3+ transport system protein, Molybdenum transport protein, putative.
    
   0.570
EYD77035.1
Sarcosine oxidase alpha subunit.
    
   0.567
EYD77036.1
Sarcosine oxidase alpha subunit; Belongs to the GcvT family.
    
   0.567
Your Current Organism:
Rubellimicrobium mesophilum
NCBI taxonomy Id: 442562
Other names: R. mesophilum DSM 19309, Rubellimicrobium mesophilum DSM 19309, Rubellimicrobium sp. MSL-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.