STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYD77388.1Transcriptional regulator, GntR family. (238 aa)    
Predicted Functional Partners:
EYD76026.1
Transcriptional regulator, GntR family.
  
     0.762
EYD77352.1
Putative regulator PutR for proline utilization, GntR family.
  
     0.733
EYD75580.1
Transcriptional regulator, GntR family protein.
  
    0.732
EYD77370.1
Hypothetical protein.
  
     0.725
EYD77777.1
Putative regulator PutR for proline utilization, GntR family; Overlaps another CDS with the same product name.
  
     0.708
EYD76206.1
UxuR uxu operon transcriptional regulator.
  
    0.680
EYD75627.1
Putative transcriptional regulatory protein, GntR family.
  
    0.634
EYD75404.1
Transcriptional regulator, GntR family.
  
     0.614
EYD76399.1
Transcriptional regulator.
  
     0.605
EYD74123.1
Transcriptional regulator, GntR family.
  
    0.559
Your Current Organism:
Rubellimicrobium mesophilum
NCBI taxonomy Id: 442562
Other names: R. mesophilum DSM 19309, Rubellimicrobium mesophilum DSM 19309, Rubellimicrobium sp. MSL-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.