STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYD77284.1Transcriptional regulator, GntR family. (237 aa)    
Predicted Functional Partners:
EYD77283.1
Dihydrodipicolinate synthase; Belongs to the DapA family.
 
     0.864
EYD77282.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  0.819
EYD77281.1
Oxidoreductase.
 
    0.811
EYD77173.1
Transcriptional regulator, GntR family.
  
     0.745
EYD76026.1
Transcriptional regulator, GntR family.
  
     0.717
EYD77352.1
Putative regulator PutR for proline utilization, GntR family.
  
     0.683
EYD77777.1
Putative regulator PutR for proline utilization, GntR family; Overlaps another CDS with the same product name.
  
     0.671
EYD75580.1
Transcriptional regulator, GntR family protein.
  
    0.613
EYD77370.1
Hypothetical protein.
  
     0.570
EYD75404.1
Transcriptional regulator, GntR family.
  
     0.523
Your Current Organism:
Rubellimicrobium mesophilum
NCBI taxonomy Id: 442562
Other names: R. mesophilum DSM 19309, Rubellimicrobium mesophilum DSM 19309, Rubellimicrobium sp. MSL-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.