STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYD77182.1Glucosamine ABC transport system, periplasmic sugar-binding protein. (410 aa)    
Predicted Functional Partners:
EYD77184.1
Glycerol-3-phosphate ABC transporter, permease protein UgpE; TC 3.A.1.1.3.
 
  0.959
EYD77183.1
Glycerol-3-phosphate ABC transporter, permease protein UgpA; TC 3.A.1.1.3.
  0.948
EYD74100.1
Maltose/maltodextrin ABC transporter, permease protein MalG.
  
  0.864
EYD74101.1
Maltose/maltodextrin ABC transporter, permease protein MalF.
 
  0.840
EYD74778.1
Maltose/maltodextrin ABC transporter, permease protein MalG.
  
  0.824
EYD78178.1
ABC-type sugar transport system, permease component.
  
  0.817
EYD76300.1
Various polyols ABC transporter, permease component 2.
 
  0.813
EYD78185.1
Various polyols ABC transporter, permease component 2.
 
  0.791
EYD75147.1
Hypothetical protein.
 
  0.781
EYD74964.1
ABC transporter permease protein.
  
  0.766
Your Current Organism:
Rubellimicrobium mesophilum
NCBI taxonomy Id: 442562
Other names: R. mesophilum DSM 19309, Rubellimicrobium mesophilum DSM 19309, Rubellimicrobium sp. MSL-20
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.