STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYD76968.1Methyltransferase type 11. (257 aa)    
Predicted Functional Partners:
EYD76969.1
Beta-xylosidase.
 
     0.952
EYD74037.1
Putative diadenosine tetraphosphatase.
   
   0.936
EYD76967.1
Putative phosphoglycerate mutase protein.
 
     0.856
EYD76970.1
Inositol-1-phosphate synthase.
 
     0.831
EYD78258.1
Nucleoside-diphosphate-sugar epimerase.
 
  
  0.822
EYD78259.1
UDP-glucose 4-epimerase.
 
  
  0.819
EYD78255.1
Uncharacterized protein.
 
     0.807
EYD78256.1
Glycosyltransferase.
 
     0.807
EYD78257.1
Putative glycosyltransferase protein.
 
     0.804
EYD75212.1
Hypothetical protein.
 
     0.794
Your Current Organism:
Rubellimicrobium mesophilum
NCBI taxonomy Id: 442562
Other names: R. mesophilum DSM 19309, Rubellimicrobium mesophilum DSM 19309, Rubellimicrobium sp. MSL-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.