STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYD76870.1Hypothetical protein. (55 aa)    
Predicted Functional Partners:
EYD76871.1
tRNA (adenine37-N(6))-methyltransferase TrmN6.
       0.668
EYD76872.1
Hypothetical protein.
       0.668
EYD76873.1
Octaprenyl-diphosphate synthase / Dimethylallyltransferase / Geranyltranstransferase; Farnesyldiphosphate synthase; Geranylgeranyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family.
       0.583
EYD74188.1
Hypothetical protein.
  
     0.575
EYD77775.1
Glycosyl transferase, group 2 family protein.
  
     0.537
EYD77155.1
Hypothetical protein.
  
     0.536
EYD72137.1
Sterol carrier family protein.
  
     0.466
EYD72109.1
MORN repeat protein.
  
     0.449
EYD75252.1
Hypothetical protein.
  
     0.434
mraZ
Cell division protein MraZ; Belongs to the MraZ family.
  
     0.430
Your Current Organism:
Rubellimicrobium mesophilum
NCBI taxonomy Id: 442562
Other names: R. mesophilum DSM 19309, Rubellimicrobium mesophilum DSM 19309, Rubellimicrobium sp. MSL-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.