STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYD76769.1Corrinoid methyltransferase protein. (233 aa)    
Predicted Functional Partners:
EYD76767.1
Betaine--homocysteine S-methyltransferase.
 
 0.997
EYD76609.1
Pterin-binding protein enzyme domain protein.
 
 0.996
EYD77342.1
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate.
   
 0.974
EYD76770.1
Hypothetical protein; FIG00992805.
 
     0.963
EYD76610.1
5,10-methylenetetrahydrofolate reductase.
 
 
  0.866
EYD77275.1
Trimethylamine methyltransferase family protein; Belongs to the trimethylamine methyltransferase family.
 
  
  0.847
EYD73568.1
Trimethylamine methyltransferase family protein; Belongs to the trimethylamine methyltransferase family.
 
  
  0.847
EYD77277.1
Trimethylamine methyltransferase MttB-like protein; Belongs to the trimethylamine methyltransferase family.
 
  
  0.833
EYD76619.1
Iron-sulfur cluster-binding protein.
 
    0.824
EYD76611.1
Hypothetical protein; FIG01075668.
 
    0.803
Your Current Organism:
Rubellimicrobium mesophilum
NCBI taxonomy Id: 442562
Other names: R. mesophilum DSM 19309, Rubellimicrobium mesophilum DSM 19309, Rubellimicrobium sp. MSL-20
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