STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYD76521.1Efflux ABC transporter, transmembrane ATP-binding protein. (589 aa)    
Predicted Functional Partners:
EYD76520.1
Hypothetical protein.
       0.805
EYD76522.1
Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress.
       0.801
EYD77043.1
ABC transporter, ATP-binding protein/permease protein.
  
 
0.787
EYD77696.1
ABC-type transport system; Involved in resistance to organic solvents, permease component.
 
   0.699
EYD75343.1
Chaperone protein DnaK; Belongs to the heat shock protein 70 family.
  
 0.633
EYD75832.1
Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
    
 
 0.615
EYD78184.1
Various polyols ABC transporter, ATP-binding protein component; Belongs to the ABC transporter superfamily.
 
     
0.600
EYD76691.1
N-Acetyl-D-glucosamine ABC transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.600
EYD76057.1
Arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
   
   0.588
infB
Translation initiation factor 2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
  
 
   0.586
Your Current Organism:
Rubellimicrobium mesophilum
NCBI taxonomy Id: 442562
Other names: R. mesophilum DSM 19309, Rubellimicrobium mesophilum DSM 19309, Rubellimicrobium sp. MSL-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.