STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYD76539.1Hydroxypyruvate isomerase; Belongs to the hyi family. (281 aa)    
Predicted Functional Partners:
EYD76540.1
Hypothetical protein; Belongs to the LDH2/MDH2 oxidoreductase family.
  
    0.776
EYD76538.1
Succinate-semialdehyde dehydrogenase [NAD], Succinate-semialdehyde dehydrogenase (NADP+).
       0.773
EYD76541.1
Tricarboxylate transport membrane protein TctA.
       0.773
EYD76536.1
Antibiotic biosynthesis monooxygenase.
       0.762
EYD76537.1
Putative WhiE protein.
       0.762
EYD76542.1
Tricarboxylate transport protein TctB.
 
     0.748
EYD73545.1
2-hydroxy-3-oxopropionate reductase.
 
 
 0.602
EYD73506.1
3-hydroxyisobutyrate dehydrogenase.
 
 
 0.586
EYD76543.1
Tricarboxylate transport protein TctC.
       0.555
EYD72117.1
D-3-phosphoglycerate dehydrogenase.
  
 
  0.501
Your Current Organism:
Rubellimicrobium mesophilum
NCBI taxonomy Id: 442562
Other names: R. mesophilum DSM 19309, Rubellimicrobium mesophilum DSM 19309, Rubellimicrobium sp. MSL-20
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