STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYD76543.1Tricarboxylate transport protein TctC. (322 aa)    
Predicted Functional Partners:
EYD76541.1
Tricarboxylate transport membrane protein TctA.
 
  
 0.962
EYD76542.1
Tricarboxylate transport protein TctB.
 
  
 0.958
EYD78394.1
Tricarboxylate transport membrane protein TctA.
 
  
 0.918
EYD78115.1
Tricarboxylate transport membrane protein TctA.
 
  
 0.918
EYD78393.1
Tricarboxylate transport protein TctB.
 
  
 0.800
EYD76537.1
Putative WhiE protein.
 
     0.600
EYD76540.1
Hypothetical protein; Belongs to the LDH2/MDH2 oxidoreductase family.
  
    0.579
EYD76538.1
Succinate-semialdehyde dehydrogenase [NAD], Succinate-semialdehyde dehydrogenase (NADP+).
       0.555
EYD76539.1
Hydroxypyruvate isomerase; Belongs to the hyi family.
       0.555
EYD76536.1
Antibiotic biosynthesis monooxygenase.
     
 0.551
Your Current Organism:
Rubellimicrobium mesophilum
NCBI taxonomy Id: 442562
Other names: R. mesophilum DSM 19309, Rubellimicrobium mesophilum DSM 19309, Rubellimicrobium sp. MSL-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.