STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYD76283.1Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA; TC 3.A.1.5.1. (543 aa)    
Predicted Functional Partners:
EYD76279.1
Oligopeptide transport ATP-binding protein OppF; TC 3.A.1.5.1; Belongs to the ABC transporter superfamily.
 
 
 0.975
EYD76280.1
Oligopeptide transport ATP-binding protein OppD; TC 3.A.1.5.1; Belongs to the ABC transporter superfamily.
 
 
 0.962
EYD76282.1
Oligopeptide transport system permease protein OppB; TC 3.A.1.5.1.
 
 0.960
EYD76281.1
Oligopeptide transport system permease protein OppC; TC 3.A.1.5.1.
 
 0.956
EYD74126.1
Oligopeptide transport ATP-binding protein OppF; TC 3.A.1.5.1; Belongs to the ABC transporter superfamily.
 
 
 0.884
EYD77127.1
Oligopeptide transport ATP-binding protein OppF; TC 3.A.1.5.1; Belongs to the ABC transporter superfamily.
 
 
  0.858
EYD72898.1
Oligopeptide transport ATP-binding protein OppF; TC 3.A.1.5.1; Belongs to the ABC transporter superfamily.
 
 
  0.851
EYD76210.1
Oligopeptide transport ATP-binding protein OppF; TC 3.A.1.5.1.
 
 
  0.837
EYD74127.1
Oligopeptide transport ATP-binding protein OppD; TC 3.A.1.5.1; Belongs to the ABC transporter superfamily.
 
 
 0.818
EYD72899.1
Oligopeptide transport ATP-binding protein OppD; TC 3.A.1.5.1; Belongs to the ABC transporter superfamily.
 
 
 0.794
Your Current Organism:
Rubellimicrobium mesophilum
NCBI taxonomy Id: 442562
Other names: R. mesophilum DSM 19309, Rubellimicrobium mesophilum DSM 19309, Rubellimicrobium sp. MSL-20
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