Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EYD73917.1 | EYD73918.1 | Rumeso_04514 | Rumeso_04515 | Sarcosine oxidase alpha subunit; Overlaps another CDS with the same product name; Belongs to the GcvT family. | Sarcosine oxidase alpha subunit; Overlaps another CDS with the same product name; Belongs to the GcvT family. | 0.963 |
EYD73917.1 | EYD73919.1 | Rumeso_04514 | Rumeso_04516 | Sarcosine oxidase alpha subunit; Overlaps another CDS with the same product name; Belongs to the GcvT family. | Sarcosine oxidase alpha subunit; Overlaps another CDS with the same product name. | 0.966 |
EYD73917.1 | EYD76108.1 | Rumeso_04514 | Rumeso_02297 | Sarcosine oxidase alpha subunit; Overlaps another CDS with the same product name; Belongs to the GcvT family. | Sarcosine oxidase alpha subunit; Overlaps another CDS with the same product name; Belongs to the GcvT family. | 0.826 |
EYD73917.1 | EYD76109.1 | Rumeso_04514 | Rumeso_02298 | Sarcosine oxidase alpha subunit; Overlaps another CDS with the same product name; Belongs to the GcvT family. | Sarcosine oxidase alpha subunit; Overlaps another CDS with the same product name; Belongs to the GcvT family. | 0.490 |
EYD73917.1 | EYD76195.1 | Rumeso_04514 | Rumeso_02202 | Sarcosine oxidase alpha subunit; Overlaps another CDS with the same product name; Belongs to the GcvT family. | Putative oxidoreductase. | 0.916 |
EYD73917.1 | EYD76365.1 | Rumeso_04514 | Rumeso_02029 | Sarcosine oxidase alpha subunit; Overlaps another CDS with the same product name; Belongs to the GcvT family. | Glutamate synthase [NADPH] large chain. | 0.907 |
EYD73917.1 | EYD77019.1 | Rumeso_04514 | Rumeso_01394 | Sarcosine oxidase alpha subunit; Overlaps another CDS with the same product name; Belongs to the GcvT family. | Sarcosine oxidase alpha subunit; Belongs to the GcvT family. | 0.427 |
EYD73917.1 | EYD77020.1 | Rumeso_04514 | Rumeso_01395 | Sarcosine oxidase alpha subunit; Overlaps another CDS with the same product name; Belongs to the GcvT family. | Sarcosine oxidase alpha subunit. | 0.606 |
EYD73917.1 | EYD77035.1 | Rumeso_04514 | Rumeso_01294 | Sarcosine oxidase alpha subunit; Overlaps another CDS with the same product name; Belongs to the GcvT family. | Sarcosine oxidase alpha subunit. | 0.615 |
EYD73917.1 | EYD77036.1 | Rumeso_04514 | Rumeso_01295 | Sarcosine oxidase alpha subunit; Overlaps another CDS with the same product name; Belongs to the GcvT family. | Sarcosine oxidase alpha subunit; Belongs to the GcvT family. | 0.427 |
EYD73918.1 | EYD73917.1 | Rumeso_04515 | Rumeso_04514 | Sarcosine oxidase alpha subunit; Overlaps another CDS with the same product name; Belongs to the GcvT family. | Sarcosine oxidase alpha subunit; Overlaps another CDS with the same product name; Belongs to the GcvT family. | 0.963 |
EYD73918.1 | EYD73919.1 | Rumeso_04515 | Rumeso_04516 | Sarcosine oxidase alpha subunit; Overlaps another CDS with the same product name; Belongs to the GcvT family. | Sarcosine oxidase alpha subunit; Overlaps another CDS with the same product name. | 0.996 |
EYD73918.1 | EYD76108.1 | Rumeso_04515 | Rumeso_02297 | Sarcosine oxidase alpha subunit; Overlaps another CDS with the same product name; Belongs to the GcvT family. | Sarcosine oxidase alpha subunit; Overlaps another CDS with the same product name; Belongs to the GcvT family. | 0.474 |
EYD73918.1 | EYD76109.1 | Rumeso_04515 | Rumeso_02298 | Sarcosine oxidase alpha subunit; Overlaps another CDS with the same product name; Belongs to the GcvT family. | Sarcosine oxidase alpha subunit; Overlaps another CDS with the same product name; Belongs to the GcvT family. | 0.856 |
EYD73918.1 | EYD76195.1 | Rumeso_04515 | Rumeso_02202 | Sarcosine oxidase alpha subunit; Overlaps another CDS with the same product name; Belongs to the GcvT family. | Putative oxidoreductase. | 0.926 |
EYD73918.1 | EYD76365.1 | Rumeso_04515 | Rumeso_02029 | Sarcosine oxidase alpha subunit; Overlaps another CDS with the same product name; Belongs to the GcvT family. | Glutamate synthase [NADPH] large chain. | 0.907 |
EYD73918.1 | EYD77019.1 | Rumeso_04515 | Rumeso_01394 | Sarcosine oxidase alpha subunit; Overlaps another CDS with the same product name; Belongs to the GcvT family. | Sarcosine oxidase alpha subunit; Belongs to the GcvT family. | 0.469 |
EYD73918.1 | EYD77020.1 | Rumeso_04515 | Rumeso_01395 | Sarcosine oxidase alpha subunit; Overlaps another CDS with the same product name; Belongs to the GcvT family. | Sarcosine oxidase alpha subunit. | 0.985 |
EYD73918.1 | EYD77035.1 | Rumeso_04515 | Rumeso_01294 | Sarcosine oxidase alpha subunit; Overlaps another CDS with the same product name; Belongs to the GcvT family. | Sarcosine oxidase alpha subunit. | 0.985 |
EYD73918.1 | EYD77036.1 | Rumeso_04515 | Rumeso_01295 | Sarcosine oxidase alpha subunit; Overlaps another CDS with the same product name; Belongs to the GcvT family. | Sarcosine oxidase alpha subunit; Belongs to the GcvT family. | 0.542 |
page 1 of 6