STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYD76215.1Hypothetical protein. (46 aa)    
Predicted Functional Partners:
EYD76216.1
Agmatinase; Belongs to the arginase family.
       0.773
EYD76214.1
Hypothetical protein.
       0.625
EYD76217.1
Hypothetical protein; Transport of small molecules.
       0.576
EYD76213.1
6-aminohexanoate-cyclic-dimer hydrolase; Belongs to the amidase family.
       0.464
EYD76218.1
Putrescine transport ATP-binding protein PotA; TC 3.A.1.11.1; Belongs to the ABC transporter superfamily.
       0.456
EYD76219.1
Hypothetical protein; Transport of small molecules.
       0.456
EYD76220.1
Putative ABC transporter permease.
       0.456
Your Current Organism:
Rubellimicrobium mesophilum
NCBI taxonomy Id: 442562
Other names: R. mesophilum DSM 19309, Rubellimicrobium mesophilum DSM 19309, Rubellimicrobium sp. MSL-20
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.