Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EYD74871.1 | EYD76033.1 | Rumeso_03512 | Rumeso_02462 | Hypothetical protein. | Putative sensory histidine kinase; Overlaps another CDS with the same product name. | 0.999 |
EYD74871.1 | EYD76034.1 | Rumeso_03512 | Rumeso_02463 | Hypothetical protein. | Putative sensory histidine kinase; Overlaps another CDS with the same product name. | 0.999 |
EYD74871.1 | EYD76035.1 | Rumeso_03512 | Rumeso_02464 | Hypothetical protein. | Putative sensor/response regulator hybrid protein. | 0.999 |
EYD74871.1 | EYD76165.1 | Rumeso_03512 | Rumeso_02240 | Hypothetical protein. | Hypothetical protein. | 0.756 |
EYD74871.1 | nadE | Rumeso_03512 | Rumeso_03658 | Hypothetical protein. | NAD synthetase / Glutamine amidotransferase chain of NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.614 |
EYD74871.1 | ribB | Rumeso_03512 | Rumeso_02530 | Hypothetical protein. | 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.905 |
EYD75069.1 | EYD76165.1 | Rumeso_03397 | Rumeso_02240 | Hypothetical protein. | Hypothetical protein. | 0.926 |
EYD75069.1 | nnrD | Rumeso_03397 | Rumeso_01333 | Hypothetical protein. | NAD(P)HX epimerase / NAD(P)HX dehydratase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...] | 0.585 |
EYD76033.1 | EYD74871.1 | Rumeso_02462 | Rumeso_03512 | Putative sensory histidine kinase; Overlaps another CDS with the same product name. | Hypothetical protein. | 0.999 |
EYD76033.1 | EYD76034.1 | Rumeso_02462 | Rumeso_02463 | Putative sensory histidine kinase; Overlaps another CDS with the same product name. | Putative sensory histidine kinase; Overlaps another CDS with the same product name. | 0.999 |
EYD76033.1 | EYD76035.1 | Rumeso_02462 | Rumeso_02464 | Putative sensory histidine kinase; Overlaps another CDS with the same product name. | Putative sensor/response regulator hybrid protein. | 0.999 |
EYD76033.1 | EYD76165.1 | Rumeso_02462 | Rumeso_02240 | Putative sensory histidine kinase; Overlaps another CDS with the same product name. | Hypothetical protein. | 0.771 |
EYD76033.1 | nadE | Rumeso_02462 | Rumeso_03658 | Putative sensory histidine kinase; Overlaps another CDS with the same product name. | NAD synthetase / Glutamine amidotransferase chain of NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.665 |
EYD76033.1 | nnrD | Rumeso_02462 | Rumeso_01333 | Putative sensory histidine kinase; Overlaps another CDS with the same product name. | NAD(P)HX epimerase / NAD(P)HX dehydratase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...] | 0.406 |
EYD76033.1 | ribB | Rumeso_02462 | Rumeso_02530 | Putative sensory histidine kinase; Overlaps another CDS with the same product name. | 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.854 |
EYD76034.1 | EYD74871.1 | Rumeso_02463 | Rumeso_03512 | Putative sensory histidine kinase; Overlaps another CDS with the same product name. | Hypothetical protein. | 0.999 |
EYD76034.1 | EYD76033.1 | Rumeso_02463 | Rumeso_02462 | Putative sensory histidine kinase; Overlaps another CDS with the same product name. | Putative sensory histidine kinase; Overlaps another CDS with the same product name. | 0.999 |
EYD76034.1 | EYD76035.1 | Rumeso_02463 | Rumeso_02464 | Putative sensory histidine kinase; Overlaps another CDS with the same product name. | Putative sensor/response regulator hybrid protein. | 0.999 |
EYD76034.1 | EYD76165.1 | Rumeso_02463 | Rumeso_02240 | Putative sensory histidine kinase; Overlaps another CDS with the same product name. | Hypothetical protein. | 0.771 |
EYD76034.1 | nadE | Rumeso_02463 | Rumeso_03658 | Putative sensory histidine kinase; Overlaps another CDS with the same product name. | NAD synthetase / Glutamine amidotransferase chain of NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.665 |
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