STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYD76107.1Sarcosine oxidase beta subunit. (417 aa)    
Predicted Functional Partners:
EYD77035.1
Sarcosine oxidase alpha subunit.
 
 0.980
EYD77020.1
Sarcosine oxidase alpha subunit.
 
 0.980
EYD76108.1
Sarcosine oxidase alpha subunit; Overlaps another CDS with the same product name; Belongs to the GcvT family.
 
 0.980
EYD76109.1
Sarcosine oxidase alpha subunit; Overlaps another CDS with the same product name; Belongs to the GcvT family.
 
 0.980
EYD73918.1
Sarcosine oxidase alpha subunit; Overlaps another CDS with the same product name; Belongs to the GcvT family.
 
 0.980
EYD73919.1
Sarcosine oxidase alpha subunit; Overlaps another CDS with the same product name.
 
 0.980
EYD77036.1
Sarcosine oxidase alpha subunit; Belongs to the GcvT family.
 
 0.978
EYD77019.1
Sarcosine oxidase alpha subunit; Belongs to the GcvT family.
 
 0.978
EYD73917.1
Sarcosine oxidase alpha subunit; Overlaps another CDS with the same product name; Belongs to the GcvT family.
 
 0.961
EYD73920.1
Sarcosine oxidase delta subunit.
 
  0.939
Your Current Organism:
Rubellimicrobium mesophilum
NCBI taxonomy Id: 442562
Other names: R. mesophilum DSM 19309, Rubellimicrobium mesophilum DSM 19309, Rubellimicrobium sp. MSL-20
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