STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYD76054.1Hypothetical protein. (156 aa)    
Predicted Functional Partners:
EYD76052.1
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
    0.820
EYD76053.1
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Overlaps another CDS with the same product name.
  
    0.820
EYD76225.1
Deoxycytidine triphosphate deaminase.
 
     0.778
EYD76051.1
Hypothetical protein.
       0.773
EYD76056.1
Hypothetical protein; Belongs to the UPF0262 family.
 
     0.773
EYD76795.1
Sensor histidine kinase in cluster with mercury reductase.
  
     0.757
EYD74178.1
Sensor histidine kinase PrrB (RegB); FIG001393.
  
     0.752
EYD74181.1
Putative hydrolase of HD superfamily; COG1896.
  
     0.721
EYD76796.1
Sensor histidine kinase in cluster with mercury reductase.
  
     0.710
hisS
Histidyl-tRNA synthetase.
  
     0.696
Your Current Organism:
Rubellimicrobium mesophilum
NCBI taxonomy Id: 442562
Other names: R. mesophilum DSM 19309, Rubellimicrobium mesophilum DSM 19309, Rubellimicrobium sp. MSL-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.