STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYD75799.1Penicillin-binding protein 1A; Overlaps another CDS with the same product name. (425 aa)    
Predicted Functional Partners:
EYD75798.1
Penicillin-binding protein 1A; Overlaps another CDS with the same product name.
     0.994
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
 
 0.990
EYD74477.1
Multimodular transpeptidase-transglycosylase.
 
 
0.886
EYD78365.1
Multimodular transpeptidase-transglycosylase.
 
 
0.884
EYD75280.1
Multimodular transpeptidase-transglycosylase.
  
  
0.851
EYD77752.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
     
 0.836
mrdB
Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
  
   
 0.728
prfB
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
       0.727
EYD72115.1
Penicillin-binding protein 2 (PBP-2).
  
 
 
 0.726
EYD75243.1
Cell division protein FtsW; Belongs to the SEDS family.
  
   
 0.711
Your Current Organism:
Rubellimicrobium mesophilum
NCBI taxonomy Id: 442562
Other names: R. mesophilum DSM 19309, Rubellimicrobium mesophilum DSM 19309, Rubellimicrobium sp. MSL-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.