Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EYD73870.1 | EYD75435.1 | Rumeso_04605 | Rumeso_03005 | Glycogen phosphorylase. | Phosphomannomutase. | 0.746 |
EYD73870.1 | EYD75732.1 | Rumeso_04605 | Rumeso_02676 | Glycogen phosphorylase. | Phosphoglucomutase; Overlaps another CDS with the same product name. | 0.929 |
EYD73870.1 | EYD75733.1 | Rumeso_04605 | Rumeso_02677 | Glycogen phosphorylase. | Phosphoglucomutase; Overlaps another CDS with the same product name. | 0.929 |
EYD73870.1 | EYD75734.1 | Rumeso_04605 | Rumeso_02678 | Glycogen phosphorylase. | Glycogen debranching enzyme; Overlaps another CDS with the same product name. | 0.819 |
EYD73870.1 | glgB | Rumeso_04605 | Rumeso_02682 | Glycogen phosphorylase. | 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.962 |
EYD73870.1 | glgC | Rumeso_04605 | Rumeso_02681 | Glycogen phosphorylase. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.940 |
EYD73870.1 | pgi | Rumeso_04605 | Rumeso_01687 | Glycogen phosphorylase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.710 |
EYD74762.1 | EYD75435.1 | Rumeso_03715 | Rumeso_03005 | Glycogen phosphorylase. | Phosphomannomutase. | 0.748 |
EYD74762.1 | EYD75732.1 | Rumeso_03715 | Rumeso_02676 | Glycogen phosphorylase. | Phosphoglucomutase; Overlaps another CDS with the same product name. | 0.929 |
EYD74762.1 | EYD75733.1 | Rumeso_03715 | Rumeso_02677 | Glycogen phosphorylase. | Phosphoglucomutase; Overlaps another CDS with the same product name. | 0.929 |
EYD74762.1 | EYD75734.1 | Rumeso_03715 | Rumeso_02678 | Glycogen phosphorylase. | Glycogen debranching enzyme; Overlaps another CDS with the same product name. | 0.819 |
EYD74762.1 | glgB | Rumeso_03715 | Rumeso_02682 | Glycogen phosphorylase. | 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.963 |
EYD74762.1 | glgC | Rumeso_03715 | Rumeso_02681 | Glycogen phosphorylase. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.942 |
EYD74762.1 | pgi | Rumeso_03715 | Rumeso_01687 | Glycogen phosphorylase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.710 |
EYD75435.1 | EYD73870.1 | Rumeso_03005 | Rumeso_04605 | Phosphomannomutase. | Glycogen phosphorylase. | 0.746 |
EYD75435.1 | EYD74762.1 | Rumeso_03005 | Rumeso_03715 | Phosphomannomutase. | Glycogen phosphorylase. | 0.748 |
EYD75435.1 | EYD75732.1 | Rumeso_03005 | Rumeso_02676 | Phosphomannomutase. | Phosphoglucomutase; Overlaps another CDS with the same product name. | 0.875 |
EYD75435.1 | EYD75733.1 | Rumeso_03005 | Rumeso_02677 | Phosphomannomutase. | Phosphoglucomutase; Overlaps another CDS with the same product name. | 0.875 |
EYD75435.1 | EYD75734.1 | Rumeso_03005 | Rumeso_02678 | Phosphomannomutase. | Glycogen debranching enzyme; Overlaps another CDS with the same product name. | 0.529 |
EYD75435.1 | glgB | Rumeso_03005 | Rumeso_02682 | Phosphomannomutase. | 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.454 |
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