STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYD75694.12-deoxy-D-gluconate 3-dehydrogenase. (253 aa)    
Predicted Functional Partners:
EYD75693.1
And related Zn-dependent dehydrogenases.
 
 
  0.906
EYD75692.1
Muconolactone isomerase,putative; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
  0.854
EYD76365.1
Glutamate synthase [NADPH] large chain.
     
 0.735
EYD76366.1
Glutamate synthase [NADPH] large chain.
     
 0.735
EYD75086.1
Flavodoxin reductase (ferredoxin-NADPH reductase) family 1, Vanillate O-demethylase oxidoreductase.
   
 0.723
EYD75689.1
Putative sugar uptake ABC transporter ATP-binding protein.
       0.718
EYD75690.1
ABC sugar transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family.
       0.718
EYD75691.1
Ribose ABC transport system, permease protein RbsC; TC 3.A.1.2.1; Belongs to the binding-protein-dependent transport system permease family.
       0.718
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
  
 
  0.693
EYD77085.1
Malonyl CoA-acyl carrier protein transacylase.
 
  0.686
Your Current Organism:
Rubellimicrobium mesophilum
NCBI taxonomy Id: 442562
Other names: R. mesophilum DSM 19309, Rubellimicrobium mesophilum DSM 19309, Rubellimicrobium sp. MSL-20
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