STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYD75564.1Ribose ABC transporter, periplasmic binding protein. (315 aa)    
Predicted Functional Partners:
EYD75563.1
Ribose ABC transport system, permease protein RbsC; TC 3.A.1.2.1; Belongs to the binding-protein-dependent transport system permease family.
   0.943
EYD74871.1
Hypothetical protein.
   
 0.937
EYD74790.1
Hypothetical protein.
   
 0.935
EYD76035.1
Putative sensor/response regulator hybrid protein.
  
 0.896
EYD76924.1
PAS/PAC sensor hybrid histidine kinase.
    
 0.894
EYD75570.1
Hypothetical protein.
    
 0.894
EYD75151.1
Hypothetical protein.
    
 0.894
EYD74921.1
Putative sensor histidine kinase/response regulator.
    
 0.894
EYD74740.1
Two-component sensor histidine kinase.
    
 0.894
EYD71516.1
Sensory box histidine kinase/response regulator.
    
 0.894
Your Current Organism:
Rubellimicrobium mesophilum
NCBI taxonomy Id: 442562
Other names: R. mesophilum DSM 19309, Rubellimicrobium mesophilum DSM 19309, Rubellimicrobium sp. MSL-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.