STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYD75426.1Hypothetical protein. (393 aa)    
Predicted Functional Partners:
EYD75427.1
Putative rhamnose oligosaccharide ABC transport system, permease component 2.
  
  0.889
EYD75428.1
Putative rhamnose oligosaccharide ABC transport system, permease component 2.
  
  0.889
EYD75429.1
Putative rhamnose oligosaccharide ABC transport system, permease component.
 
  0.889
EYD76403.1
Sugar ABC transporter, permease.
  
  0.824
EYD75430.1
Putative rhamnose oligosaccharide ABC transport system, substrate-binding protein component.
  
  0.819
EYD74277.1
Integral membrane transport protein.
  
  0.810
EYD75147.1
Hypothetical protein.
  
  0.795
EYD77400.1
ABC-type sugar transport system, permease component.
  
  0.782
EYD77184.1
Glycerol-3-phosphate ABC transporter, permease protein UgpE; TC 3.A.1.1.3.
  
  0.774
EYD74289.1
SN-glycerol-3-phosphate transport system permease protein UgpA; TC 3.A.1.1.3.
  
  0.771
Your Current Organism:
Rubellimicrobium mesophilum
NCBI taxonomy Id: 442562
Other names: R. mesophilum DSM 19309, Rubellimicrobium mesophilum DSM 19309, Rubellimicrobium sp. MSL-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.