STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYD75320.1Transcriptional regulator. (251 aa)    
Predicted Functional Partners:
EYD76906.1
Hypothetical protein; FIG00983409.
  
     0.771
EYD75580.1
Transcriptional regulator, GntR family protein.
  
    0.763
EYD77370.1
Hypothetical protein.
  
     0.760
EYD76206.1
UxuR uxu operon transcriptional regulator.
  
    0.748
EYD77777.1
Putative regulator PutR for proline utilization, GntR family; Overlaps another CDS with the same product name.
  
     0.739
EYD75404.1
Transcriptional regulator, GntR family.
  
     0.721
EYD75627.1
Putative transcriptional regulatory protein, GntR family.
  
    0.701
EYD74775.1
Putative transcription regulator protein.
  
    0.621
EYD76204.1
Hypothetical protein.
  
    0.512
EYD75321.1
ABC transporter, periplasmic binding protein.
       0.509
Your Current Organism:
Rubellimicrobium mesophilum
NCBI taxonomy Id: 442562
Other names: R. mesophilum DSM 19309, Rubellimicrobium mesophilum DSM 19309, Rubellimicrobium sp. MSL-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.