STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYD75080.1Putative integral membrane protein. (278 aa)    
Predicted Functional Partners:
EYD75081.1
Sarcosine oxidase alpha subunit; Belongs to the GcvT family.
 
     0.820
EYD75085.1
Hypothetical protein; Mlr7321.
  
     0.720
EYD75087.1
Hypothetical protein; FIG00986085.
  
     0.664
EYD78101.1
Hemoglobin-like protein HbO.
 
 
   0.649
EYD78121.1
L-proline glycine betaine binding protein ABC transporter protein ProX; TC 3.A.1.12.1.
  
 
  0.569
EYD75084.1
Aminomethyltransferase; Belongs to the GcvT family.
  
     0.567
EYD75079.1
Small molecule metabolism.
  
     0.539
EYD76417.1
Sarcosine oxidase alpha subunit; Belongs to the GcvT family.
  
     0.537
EYD75086.1
Flavodoxin reductase (ferredoxin-NADPH reductase) family 1, Vanillate O-demethylase oxidoreductase.
  
     0.529
EYD75504.1
Hypothetical protein; Mll1313.
  
  
 0.517
Your Current Organism:
Rubellimicrobium mesophilum
NCBI taxonomy Id: 442562
Other names: R. mesophilum DSM 19309, Rubellimicrobium mesophilum DSM 19309, Rubellimicrobium sp. MSL-20
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.