STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYD74962.12-hydroxychromene-2-carboxylate isomerase/DsbA-like thioredoxin domain protein. (225 aa)    
Predicted Functional Partners:
EYD73840.1
Arsenate reductase.
   
 
 0.968
EYD73884.1
Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
    
   0.659
EYD74963.1
Maltose/maltodextrin ABC transporter, ATP-binding protein.
  
    0.586
EYD73967.1
NADPH:quinone oxidoreductase.
 
    0.517
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
   
   0.515
EYD76629.1
Hypothetical protein.
  
 
 0.506
EYD75795.1
Protein-disulfide isomerase.
  
 
 0.506
EYD74676.1
Periplasmic thiol:disulfide interchange protein DsbA.
  
 
 0.506
EYD73510.1
Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation.
  
  
 0.418
EYD78101.1
Hemoglobin-like protein HbO.
  
  
 0.416
Your Current Organism:
Rubellimicrobium mesophilum
NCBI taxonomy Id: 442562
Other names: R. mesophilum DSM 19309, Rubellimicrobium mesophilum DSM 19309, Rubellimicrobium sp. MSL-20
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