Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EYD74044.1 | EYD74515.1 | Rumeso_04415 | Rumeso_03811 | Hypothetical protein. | NADH pyrophosphatase. | 0.425 |
| EYD74044.1 | nadD | Rumeso_04415 | Rumeso_00954 | Hypothetical protein. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.563 |
| EYD74044.1 | nadE | Rumeso_04415 | Rumeso_03658 | Hypothetical protein. | NAD synthetase / Glutamine amidotransferase chain of NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.844 |
| EYD74044.1 | nadK | Rumeso_04415 | Rumeso_02934 | Hypothetical protein. | NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.463 |
| EYD74515.1 | EYD74044.1 | Rumeso_03811 | Rumeso_04415 | NADH pyrophosphatase. | Hypothetical protein. | 0.425 |
| EYD74515.1 | nadD | Rumeso_03811 | Rumeso_00954 | NADH pyrophosphatase. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.829 |
| EYD74515.1 | nadE | Rumeso_03811 | Rumeso_03658 | NADH pyrophosphatase. | NAD synthetase / Glutamine amidotransferase chain of NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.926 |
| EYD74515.1 | nadK | Rumeso_03811 | Rumeso_02934 | NADH pyrophosphatase. | NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.816 |
| EYD74793.1 | coaD | Rumeso_03656 | Rumeso_02604 | C-terminal domain protein of CinA type S; Protein Implicated in DNA repair function with RecA and MutS; Belongs to the CinA family. | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.459 |
| EYD74793.1 | nadD | Rumeso_03656 | Rumeso_00954 | C-terminal domain protein of CinA type S; Protein Implicated in DNA repair function with RecA and MutS; Belongs to the CinA family. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.841 |
| EYD74793.1 | nadE | Rumeso_03656 | Rumeso_03658 | C-terminal domain protein of CinA type S; Protein Implicated in DNA repair function with RecA and MutS; Belongs to the CinA family. | NAD synthetase / Glutamine amidotransferase chain of NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.908 |
| EYD74793.1 | nadK | Rumeso_03656 | Rumeso_02934 | C-terminal domain protein of CinA type S; Protein Implicated in DNA repair function with RecA and MutS; Belongs to the CinA family. | NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.405 |
| EYD76365.1 | EYD76366.1 | Rumeso_02029 | Rumeso_02030 | Glutamate synthase [NADPH] large chain. | Glutamate synthase [NADPH] large chain. | 0.999 |
| EYD76365.1 | nadE | Rumeso_02029 | Rumeso_03658 | Glutamate synthase [NADPH] large chain. | NAD synthetase / Glutamine amidotransferase chain of NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.877 |
| EYD76366.1 | EYD76365.1 | Rumeso_02030 | Rumeso_02029 | Glutamate synthase [NADPH] large chain. | Glutamate synthase [NADPH] large chain. | 0.999 |
| EYD76366.1 | nadE | Rumeso_02030 | Rumeso_03658 | Glutamate synthase [NADPH] large chain. | NAD synthetase / Glutamine amidotransferase chain of NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.877 |
| EYD77135.1 | nadD | Rumeso_01247 | Rumeso_00954 | NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.820 |
| EYD77135.1 | nadE | Rumeso_01247 | Rumeso_03658 | NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | NAD synthetase / Glutamine amidotransferase chain of NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.881 |
| EYD77135.1 | nadK | Rumeso_01247 | Rumeso_02934 | NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.912 |
| EYD78046.1 | nadE | Rumeso_00383 | Rumeso_03658 | Dihydropyrimidine dehydrogenase (NADP+). | NAD synthetase / Glutamine amidotransferase chain of NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.881 |
page 1 of 3