STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYD74626.1AttE component of AttEFGH ABC transport system. (221 aa)    
Predicted Functional Partners:
EYD74625.1
AttF component of AttEFGH ABC transport system / AttG component of AttEFGH ABC transport system.
 
 0.999
EYD74248.1
ABC-type antimicrobial peptide transport system, permease component.
  
 0.999
EYD78304.1
Lipoprotein releasing system transmembrane protein LolC.
  
 0.994
EYD74712.1
Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
   
 
 0.903
EYD74624.1
AttH component of AttEFGH ABC transport system.
 
   
 0.818
EYD74627.1
Hypothetical protein.
       0.773
EYD74628.1
Hypothetical protein.
       0.768
EYD76527.1
Type I secretion outer membrane protein, TolC precursor.
   
 
 0.688
EYD77054.1
ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system.
  
     0.678
EYD74564.1
Phenylalanyl-tRNA synthetase alpha chain; Overlaps another CDS with the same product name.
 
 
   0.655
Your Current Organism:
Rubellimicrobium mesophilum
NCBI taxonomy Id: 442562
Other names: R. mesophilum DSM 19309, Rubellimicrobium mesophilum DSM 19309, Rubellimicrobium sp. MSL-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.