STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EYD74459.1Eukaryotic translation initiation factor 3 subunit 10. (280 aa)    
Predicted Functional Partners:
EYD74341.1
Heparinase II/III-like protein.
  
     0.688
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
       0.626
prmC
Methylase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.
       0.626
EYD77642.1
Hypothetical protein.
  
     0.549
EYD75355.1
Putative nucleic-acid-binding protein implicated in transcription termination; COG2740; ribosomal protein L7Ae family protein.
  
     0.543
EYD73552.1
Nitrogen regulation protein NtrY.
  
     0.542
EYD76772.1
Ribonuclease D.
  
     0.492
EYD74173.1
ATP-dependent nuclease subunit B; FIG041266.
  
     0.461
EYD77166.1
Aerobic cobaltochelatase CobT subunit.
  
     0.449
EYD77162.1
Aerobic cobaltochelatase CobS subunit.
  
     0.445
Your Current Organism:
Rubellimicrobium mesophilum
NCBI taxonomy Id: 442562
Other names: R. mesophilum DSM 19309, Rubellimicrobium mesophilum DSM 19309, Rubellimicrobium sp. MSL-20
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.